The sensational discovery of modern humans in the Levant 177-194 thousand years ago should cause a rethink of the currently held Out-of-Africa orthodoxy.
By Out-of-Africa, I mean here the origin of anatomically modern humans, as opposed to the earlier origin of the genus Homo or the later origin of behaviorally fully modern humans.
Two main pieces of evidence supported the conventional OOA theory:
1. The observation that modern Eurasians possess a subset of the genetic variation of modern Africans.
2. The greater antiquity of AMH humans in the African rather than the Eurasian palaeoanthropological record.
Both these observations are in crisis.
1a. The oldest African fossil AMH is in North Africa (Morocco, Jebel Irhoud); modern genetic variation does not single out this region as a potential source of modern humans. In short, modern genetic variation has nothing to say about where AMH originated.
1b. Eurasians can no longer be seen as a subset of Africans, given that they possess genetic variation from Denisovans, a layer of ancestry earlier than all extant AMH. While it is still true that most Eurasian genetic material is a subset of that of modern Africans, it is also true that the deepest known lineage of humans is the Denisovan-Sima de los huesos, with no evidence for any deeper African lineage. Within humans as a whole, Africans possess a subset of Eurasian genetic variation.
2a. African priority received a boost by 0.1My by the redating of Jebel Irhoud last year. And, non-African AMH received a boost of 0.05My by the Hershkovitz et al. paper yesterday. A very short time ago, Ethiopia boasted the oldest AMH by 0.07My and now it's tied with the Levant and beaten by Morocco. It's a bit silly to argue for temporal priority based on the spotty and ever-shifting palaeoanthropological record.
2b. It is virtually untenable to consider the ~120,000 year old Shkul/Qafzeh hominins as a failed Out-of-Africa, since it now seems that they may have been descendants from the Mislya Cave population of >50,000 or even >100,000 years earlier.
I had previously supported a "two deserts" theory of human origins in which AMH originated in North Africa (Sahara) and then left Africa >100kya as evidenced by the Shkul/Qafzeh hominins and/or the Nubian technocomplex in Arabia. While I am still convinced that AMH originated somewhere in North Africa or the Near East, I am less certain as to where.
Science 26 Jan 2018:
Vol. 359, Issue 6374, pp. 456-459
DOI: 10.1126/science.aap8369
The earliest modern humans outside Africa
Israel Hershkovitz et al.
To date, the earliest modern human fossils found outside of Africa are dated to around 90,000 to 120,000 years ago at the Levantine sites of Skhul and Qafzeh. A maxilla and associated dentition recently discovered at Misliya Cave, Israel, was dated to 177,000 to 194,000 years ago, suggesting that members of the Homo sapiens clade left Africa earlier than previously thought. This finding changes our view on modern human dispersal and is consistent with recent genetic studies, which have posited the possibility of an earlier dispersal of Homo sapiens around 220,000 years ago. The Misliya maxilla is associated with full-fledged Levallois technology in the Levant, suggesting that the emergence of this technology is linked to the appearance of Homo sapiens in the region, as has been documented in Africa.
Link
Showing posts with label Paleoanthropology. Show all posts
Showing posts with label Paleoanthropology. Show all posts
January 26, 2018
June 08, 2017
Out of North Africa
I had previously called Irhoud 1 "The Father of Mankind" and proposed a "two deserts" theory of human evolution whereby our species originated in North Africa, and was pumped out of it to both the Middle East (and especially Arabia, the 2nd desert) and Sub-Saharan Africa during periods of Saharan aridity. This Out-of-North Africa theory (together with the secondary Out-of-Arabia expansion ~70kya) is responsible for the spread of Homo sapiens around the world.
The discovery and re-dating of modern human remains from Irhoud of course adds support to this theory and places North Africa as the most probable cradle of our species, with a comfortable 100kya buffer to the next place where modern humans are detected (the Omo remains of East Africa), and another comfortable 100kya buffer to the next place (Israel and the Skhul/Qafzeh hominins).
The interpretation of these findings in terms of Homo sapiens emerging out of a sort of multi-regional evolution involving all Africa is of course wrong. There is no reason to think of a single species evolving across the huge African continent. The early distribution of sapiens remains are in North Africa, East Africa, and the Near East, and such remains are absent in West/Central/South Africa.
The multi-regionalists lost the game in Eurasia, as it turned out that Eurasians only have ~2% archaic admixture, and they are inventing Multiregionalism-in-Africa.
Whatever finds we do have from Sub-Saharan Africa, some of them quite late (such as the Iwo Eleru remains from Nigeria), others of similar age as Irhoud (such as Florisbad and the recently described H. naledi from South Africa) did not belong to our species. The first modern humans appeared in South Africa with the Later Stone Age (probably associated with the migration of Y-chromosome haplogroup E into Africa), and the Hofmeyr skull (which resembled Eurasians and not the eternally romanticized Khoe-San). Even in East Africa the advent of modernity was not clear-cut (see Omo I vs. II and the more archaic later Herto specimen).
It seems that people were misled into thinking of Sub-Saharan Africa as the origin of our species by the genetic observation of greater genetic diversity of Sub-Saharan Africans. But, this diversity could have come about by admixture between people from North Africa and pre-existing people of Sub-Saharan Africa (both early waves of AMH and non-AMH).
It's not certain that North Africa will be the end of the story. Fashions shifted from the Near East to East Africa, to North Africa, with every new find. But, the fact that we do find the earliest modern humans in these areas, while we find non-AMH elsewhere (e.g. Europe or South Africa) is gradually constraining the solution to the problem of our origins. My bet remains North Africa; time will tell.
The discovery and re-dating of modern human remains from Irhoud of course adds support to this theory and places North Africa as the most probable cradle of our species, with a comfortable 100kya buffer to the next place where modern humans are detected (the Omo remains of East Africa), and another comfortable 100kya buffer to the next place (Israel and the Skhul/Qafzeh hominins).
The interpretation of these findings in terms of Homo sapiens emerging out of a sort of multi-regional evolution involving all Africa is of course wrong. There is no reason to think of a single species evolving across the huge African continent. The early distribution of sapiens remains are in North Africa, East Africa, and the Near East, and such remains are absent in West/Central/South Africa.
The multi-regionalists lost the game in Eurasia, as it turned out that Eurasians only have ~2% archaic admixture, and they are inventing Multiregionalism-in-Africa.
Whatever finds we do have from Sub-Saharan Africa, some of them quite late (such as the Iwo Eleru remains from Nigeria), others of similar age as Irhoud (such as Florisbad and the recently described H. naledi from South Africa) did not belong to our species. The first modern humans appeared in South Africa with the Later Stone Age (probably associated with the migration of Y-chromosome haplogroup E into Africa), and the Hofmeyr skull (which resembled Eurasians and not the eternally romanticized Khoe-San). Even in East Africa the advent of modernity was not clear-cut (see Omo I vs. II and the more archaic later Herto specimen).
It seems that people were misled into thinking of Sub-Saharan Africa as the origin of our species by the genetic observation of greater genetic diversity of Sub-Saharan Africans. But, this diversity could have come about by admixture between people from North Africa and pre-existing people of Sub-Saharan Africa (both early waves of AMH and non-AMH).
It's not certain that North Africa will be the end of the story. Fashions shifted from the Near East to East Africa, to North Africa, with every new find. But, the fact that we do find the earliest modern humans in these areas, while we find non-AMH elsewhere (e.g. Europe or South Africa) is gradually constraining the solution to the problem of our origins. My bet remains North Africa; time will tell.
March 03, 2017
Incipient Mongoloids (or elusive Denisovans) 105-125kya in China?
The authors claim that these archaic humans from China show parallels to both modern eastern Eurasians (Mongoloids) and to Neandertals. The relationship with the Neandertals makes them prime candidates for the elusive Denisovans who were a sister group to Neandertals but are morphologically unknown (since all we've got is a genome, teeth, and a pinky). The relationship with Mongoloids suggest an appearance of Mongoloid morphology pre-dating the transition to sapiens, and brings to mind past claims about incipient Caucasoid morphology in Neandertals. Did aspects of modern Eurasian morphology originate in pre-sapiens archaic Eurasians? Hopefully someone's studying DNA from these crania as we speak.
Science 03 Mar 2017: Vol. 355, Issue 6328, pp. 969-972 DOI: 10.1126/science.aal2482
Late Pleistocene archaic human crania from Xuchang, China
Zhan-Yang Li et al.
Two early Late Pleistocene (~105,000- to 125,000-year-old) crania from Lingjing, Xuchang, China, exhibit a morphological mosaic with differences from and similarities to their western contemporaries. They share pan–Old World trends in encephalization and in supraorbital, neurocranial vault, and nuchal gracilization. They reflect eastern Eurasian ancestry in having low, sagittally flat, and inferiorly broad neurocrania. They share occipital (suprainiac and nuchal torus) and temporal labyrinthine (semicircular canal) morphology with the Neandertals. This morphological combination reflects Pleistocene human evolutionary patterns in general biology, as well as both regional continuity and interregional population dynamics.
Link
Science 03 Mar 2017: Vol. 355, Issue 6328, pp. 969-972 DOI: 10.1126/science.aal2482
Late Pleistocene archaic human crania from Xuchang, China
Zhan-Yang Li et al.
Two early Late Pleistocene (~105,000- to 125,000-year-old) crania from Lingjing, Xuchang, China, exhibit a morphological mosaic with differences from and similarities to their western contemporaries. They share pan–Old World trends in encephalization and in supraorbital, neurocranial vault, and nuchal gracilization. They reflect eastern Eurasian ancestry in having low, sagittally flat, and inferiorly broad neurocrania. They share occipital (suprainiac and nuchal torus) and temporal labyrinthine (semicircular canal) morphology with the Neandertals. This morphological combination reflects Pleistocene human evolutionary patterns in general biology, as well as both regional continuity and interregional population dynamics.
Link
June 27, 2016
37,000 year old skull from Malaysia related to indigenous people of Borneo
Front. Ecol. Evol., 27 June 2016 | http://dx.doi.org/10.3389/fevo.2016.00075
Deep Skull from Niah Cave and the Pleistocene Peopling of Southeast Asia
Darren Curnoe et al.
The Deep Skull from Niah Cave in Sarawak (Malaysia) is the oldest anatomically modern human recovered from island Southeast Asia. For more than 50 years its relevance to tracing the prehistory of the region has been controversial. The most widely held view, originating with Brothwell's 1960 description and analysis, is that the Niah individual is related to Indigenous Australians. Here we undertake a new assessment of the Deep Skull and consider its bearing on this question. In doing so, we provide a new and comprehensive description of the cranium including a reassessment of its ontogenetic age, sex, morphology, and affinities. We conclude that this individual was most likely to have been of advanced age and female, rather than an adolescent male as originally proposed. The morphological evidence strongly suggests that the Deep Skull samples the earliest modern humans to have settled Borneo, most likely originating on mainland East Asia. We also show that the affinities of the specimen are most likely to be with the contemporary indigenous people of Borneo, although, similarities to the population sometimes referred to as Philippine Negritos cannot be excluded. Finally, our research suggests that the widely supported “two-layer” hypothesis for the Pleistocene peopling of East/Southeast Asia is unlikely to apply to the earliest inhabitants of Borneo, in-line with the picture emerging from genetic studies of the contemporary people from the region.
Link
Deep Skull from Niah Cave and the Pleistocene Peopling of Southeast Asia
Darren Curnoe et al.
The Deep Skull from Niah Cave in Sarawak (Malaysia) is the oldest anatomically modern human recovered from island Southeast Asia. For more than 50 years its relevance to tracing the prehistory of the region has been controversial. The most widely held view, originating with Brothwell's 1960 description and analysis, is that the Niah individual is related to Indigenous Australians. Here we undertake a new assessment of the Deep Skull and consider its bearing on this question. In doing so, we provide a new and comprehensive description of the cranium including a reassessment of its ontogenetic age, sex, morphology, and affinities. We conclude that this individual was most likely to have been of advanced age and female, rather than an adolescent male as originally proposed. The morphological evidence strongly suggests that the Deep Skull samples the earliest modern humans to have settled Borneo, most likely originating on mainland East Asia. We also show that the affinities of the specimen are most likely to be with the contemporary indigenous people of Borneo, although, similarities to the population sometimes referred to as Philippine Negritos cannot be excluded. Finally, our research suggests that the widely supported “two-layer” hypothesis for the Pleistocene peopling of East/Southeast Asia is unlikely to apply to the earliest inhabitants of Borneo, in-line with the picture emerging from genetic studies of the contemporary people from the region.
Link
June 08, 2016
700 thousand year old ancestors of H. floresiensis
Nature 534, 245–248 (09 June 2016) doi:10.1038/nature17999
Homo floresiensis-like fossils from the early Middle Pleistocene of Flores
Gerrit D. van den Bergh, Yousuke Kaifu, Iwan Kurniawan, Reiko T. Kono, Adam Brumm, Erick Setiyabudi, Fachroel Aziz & Michael J. Morwood
The evolutionary origin of Homo floresiensis, a diminutive hominin species previously known only by skeletal remains from Liang Bua in western Flores, Indonesia, has been intensively debated. It is a matter of controversy whether this primitive form, dated to the Late Pleistocene, evolved from early Asian Homo erectus and represents a unique and striking case of evolutionary reversal in hominin body and brain size within an insular environment1, 2, 3, 4. The alternative hypothesis is that H. floresiensis derived from an older, smaller-brained member of our genus, such as Homo habilis, or perhaps even late Australopithecus, signalling a hitherto undocumented dispersal of hominins from Africa into eastern Asia by two million years ago (2 Ma)5, 6. Here we describe hominin fossils excavated in 2014 from an early Middle Pleistocene site (Mata Menge) in the So’a Basin of central Flores. These specimens comprise a mandible fragment and six isolated teeth belonging to at least three small-jawed and small-toothed individuals. Dating to ~0.7 Ma, these fossils now constitute the oldest hominin remains from Flores7. The Mata Menge mandible and teeth are similar in dimensions and morphological characteristics to those of H. floresiensis from Liang Bua. The exception is the mandibular first molar, which retains a more primitive condition. Notably, the Mata Menge mandible and molar are even smaller in size than those of the two existing H. floresiensis individuals from Liang Bua. The Mata Menge fossils are derived compared with Australopithecus and H. habilis, and so tend to support the view that H. floresiensis is a dwarfed descendent of early Asian H. erectus. Our findings suggest that hominins on Flores had acquired extremely small body size and other morphological traits specific to H. floresiensis at an unexpectedly early time.
Link
Nature 534, 249–253 (09 June 2016) doi:10.1038/nature17663
Age and context of the oldest known hominin fossils from Flores
Adam Brumm, Gerrit D. van den Bergh, Michael Storey, Iwan Kurniawan, Brent V. Alloway, Ruly Setiawan, Erick Setiyabudi, Rainer Grün, Mark W. Moore, Dida Yurnaldi, Mika R. Puspaningrum, Unggul P. Wibowo, Halmi Insani, Indra Sutisna, John A. Westgate, Nick J. G. Pearce, Mathieu Duval, Hanneke J. M. Meijer, Fachroel Aziz, Thomas Sutikna, Sander van der Kaars, Stephanie Flude & Michael J. Morwood
Recent excavations at the early Middle Pleistocene site of Mata Menge in the So’a Basin of central Flores, Indonesia, have yielded hominin fossils1 attributed to a population ancestral to Late Pleistocene Homo floresiensis2. Here we describe the age and context of the Mata Menge hominin specimens and associated archaeological findings. The fluvial sandstone layer from which the in situ fossils were excavated in 2014 was deposited in a small valley stream around 700 thousand years ago, as indicated by 40Ar/39Ar and fission track dates on stratigraphically bracketing volcanic ash and pyroclastic density current deposits, in combination with coupled uranium-series and electron spin resonance dating of fossil teeth. Palaeoenvironmental data indicate a relatively dry climate in the So’a Basin during the early Middle Pleistocene, while various lines of evidence suggest the hominins inhabited a savannah-like open grassland habitat with a wetland component. The hominin fossils occur alongside the remains of an insular fauna and a simple stone technology that is markedly similar to that associated with Late Pleistocene H. floresiensis.
Link
Homo floresiensis-like fossils from the early Middle Pleistocene of Flores
Gerrit D. van den Bergh, Yousuke Kaifu, Iwan Kurniawan, Reiko T. Kono, Adam Brumm, Erick Setiyabudi, Fachroel Aziz & Michael J. Morwood
The evolutionary origin of Homo floresiensis, a diminutive hominin species previously known only by skeletal remains from Liang Bua in western Flores, Indonesia, has been intensively debated. It is a matter of controversy whether this primitive form, dated to the Late Pleistocene, evolved from early Asian Homo erectus and represents a unique and striking case of evolutionary reversal in hominin body and brain size within an insular environment1, 2, 3, 4. The alternative hypothesis is that H. floresiensis derived from an older, smaller-brained member of our genus, such as Homo habilis, or perhaps even late Australopithecus, signalling a hitherto undocumented dispersal of hominins from Africa into eastern Asia by two million years ago (2 Ma)5, 6. Here we describe hominin fossils excavated in 2014 from an early Middle Pleistocene site (Mata Menge) in the So’a Basin of central Flores. These specimens comprise a mandible fragment and six isolated teeth belonging to at least three small-jawed and small-toothed individuals. Dating to ~0.7 Ma, these fossils now constitute the oldest hominin remains from Flores7. The Mata Menge mandible and teeth are similar in dimensions and morphological characteristics to those of H. floresiensis from Liang Bua. The exception is the mandibular first molar, which retains a more primitive condition. Notably, the Mata Menge mandible and molar are even smaller in size than those of the two existing H. floresiensis individuals from Liang Bua. The Mata Menge fossils are derived compared with Australopithecus and H. habilis, and so tend to support the view that H. floresiensis is a dwarfed descendent of early Asian H. erectus. Our findings suggest that hominins on Flores had acquired extremely small body size and other morphological traits specific to H. floresiensis at an unexpectedly early time.
Link
Nature 534, 249–253 (09 June 2016) doi:10.1038/nature17663
Age and context of the oldest known hominin fossils from Flores
Adam Brumm, Gerrit D. van den Bergh, Michael Storey, Iwan Kurniawan, Brent V. Alloway, Ruly Setiawan, Erick Setiyabudi, Rainer Grün, Mark W. Moore, Dida Yurnaldi, Mika R. Puspaningrum, Unggul P. Wibowo, Halmi Insani, Indra Sutisna, John A. Westgate, Nick J. G. Pearce, Mathieu Duval, Hanneke J. M. Meijer, Fachroel Aziz, Thomas Sutikna, Sander van der Kaars, Stephanie Flude & Michael J. Morwood
Recent excavations at the early Middle Pleistocene site of Mata Menge in the So’a Basin of central Flores, Indonesia, have yielded hominin fossils1 attributed to a population ancestral to Late Pleistocene Homo floresiensis2. Here we describe the age and context of the Mata Menge hominin specimens and associated archaeological findings. The fluvial sandstone layer from which the in situ fossils were excavated in 2014 was deposited in a small valley stream around 700 thousand years ago, as indicated by 40Ar/39Ar and fission track dates on stratigraphically bracketing volcanic ash and pyroclastic density current deposits, in combination with coupled uranium-series and electron spin resonance dating of fossil teeth. Palaeoenvironmental data indicate a relatively dry climate in the So’a Basin during the early Middle Pleistocene, while various lines of evidence suggest the hominins inhabited a savannah-like open grassland habitat with a wetland component. The hominin fossils occur alongside the remains of an insular fauna and a simple stone technology that is markedly similar to that associated with Late Pleistocene H. floresiensis.
Link
April 01, 2016
Zhiren cave human remains: 116-106 ka old
Quaternary International doi:10.1016/j.quaint.2015.12.088
The age of human remains and associated fauna from Zhiren Cave in Guangxi, southern China
Yanjun Cai et al.
Zhiren Cave in southern China is an important site for the study of the origin and the environmental background of early modern humans. The combination of Elephas kiangnanensis, Elephas maximus, and Megatapirus augustus, indicates an early representative of the typical Asian elephant fauna. Previous U-series dating of flowstone calcite has pinpointed an upper age limit for the fossils of about 100 ka. In order to achieve a better comprehension of the chronology of the modern human and contemporaneous faunal assemblage, paleomagnetic, stratigraphic, and optically stimulated luminescence (OSL) dating methods have been applied to the cave sediments. Paleomagnetic analyses reveal that there is a reversed polarity excursion below the fossiliferous layer. This excursion can be regarded as the Blake excursion event, given the U-series ages of the overlying flowstone calcite, the OSL measurements, the virtual geomagnetic pole (VGP) path of the excursion, the two reverse polarity zones within this excursion event, and the characteristic of the fauna assemblage. The human remains and mammalian fauna assemblage can be bracketed to 116–106 ka. Application of OSL dating leads to erroneous ages, largely due to the uncertainty associated with the estimation on the dose rates.
Link
The age of human remains and associated fauna from Zhiren Cave in Guangxi, southern China
Yanjun Cai et al.
Zhiren Cave in southern China is an important site for the study of the origin and the environmental background of early modern humans. The combination of Elephas kiangnanensis, Elephas maximus, and Megatapirus augustus, indicates an early representative of the typical Asian elephant fauna. Previous U-series dating of flowstone calcite has pinpointed an upper age limit for the fossils of about 100 ka. In order to achieve a better comprehension of the chronology of the modern human and contemporaneous faunal assemblage, paleomagnetic, stratigraphic, and optically stimulated luminescence (OSL) dating methods have been applied to the cave sediments. Paleomagnetic analyses reveal that there is a reversed polarity excursion below the fossiliferous layer. This excursion can be regarded as the Blake excursion event, given the U-series ages of the overlying flowstone calcite, the OSL measurements, the virtual geomagnetic pole (VGP) path of the excursion, the two reverse polarity zones within this excursion event, and the characteristic of the fauna assemblage. The human remains and mammalian fauna assemblage can be bracketed to 116–106 ka. Application of OSL dating leads to erroneous ages, largely due to the uncertainty associated with the estimation on the dose rates.
Link
March 31, 2016
Middle (not Upper) Paleolithic hobbits
Nature (2016) doi:10.1038/nature17179
Revised stratigraphy and chronology for Homo floresiensis at Liang Bua in Indonesia
Thomas Sutikna, Matthew W. Tocheri, Michael J. Morwood, E. Wahyu Saptomo, Jatmiko, Rokus Due Awe, Sri Wasisto, Kira E. Westaway, Maxime Aubert, Bo Li, Jian-xin Zhao, Michael Storey, Brent V. Alloway, Mike W. Morley, Hanneke J. M. Meijer, Gerrit D. van den Bergh, Rainer Grün, Anthony Dosseto, Adam Brumm, William L. Jungers & Richard G. Roberts
Homo floresiensis, a primitive hominin species discovered in Late Pleistocene sediments at Liang Bua (Flores, Indonesia)1, 2, 3, has generated wide interest and scientific debate. A major reason this taxon is controversial is because the H. floresiensis-bearing deposits, which include associated stone artefacts2, 3, 4 and remains of other extinct endemic fauna5, 6, were dated to between about 95 and 12 thousand calendar years (kyr) ago2, 3, 7. These ages suggested that H. floresiensis survived until long after modern humans reached Australia by ~50 kyr ago8, 9, 10. Here we report new stratigraphic and chronological evidence from Liang Bua that does not support the ages inferred previously for the H. floresiensis holotype (LB1), ~18 thousand calibrated radiocarbon years before present (kyr cal. BP), or the time of last appearance of this species (about 17 or 13–11 kyr cal. BP)1, 2, 3, 7, 11. Instead, the skeletal remains of H. floresiensis and the deposits containing them are dated to between about 100 and 60 kyr ago, whereas stone artefacts attributable to this species range from about 190 to 50 kyr in age. Whether H. floresiensis survived after 50 kyr ago—potentially encountering modern humans on Flores or other hominins dispersing through southeast Asia, such as Denisovans12, 13—is an open question.
Link
Revised stratigraphy and chronology for Homo floresiensis at Liang Bua in Indonesia
Thomas Sutikna, Matthew W. Tocheri, Michael J. Morwood, E. Wahyu Saptomo, Jatmiko, Rokus Due Awe, Sri Wasisto, Kira E. Westaway, Maxime Aubert, Bo Li, Jian-xin Zhao, Michael Storey, Brent V. Alloway, Mike W. Morley, Hanneke J. M. Meijer, Gerrit D. van den Bergh, Rainer Grün, Anthony Dosseto, Adam Brumm, William L. Jungers & Richard G. Roberts
Homo floresiensis, a primitive hominin species discovered in Late Pleistocene sediments at Liang Bua (Flores, Indonesia)1, 2, 3, has generated wide interest and scientific debate. A major reason this taxon is controversial is because the H. floresiensis-bearing deposits, which include associated stone artefacts2, 3, 4 and remains of other extinct endemic fauna5, 6, were dated to between about 95 and 12 thousand calendar years (kyr) ago2, 3, 7. These ages suggested that H. floresiensis survived until long after modern humans reached Australia by ~50 kyr ago8, 9, 10. Here we report new stratigraphic and chronological evidence from Liang Bua that does not support the ages inferred previously for the H. floresiensis holotype (LB1), ~18 thousand calibrated radiocarbon years before present (kyr cal. BP), or the time of last appearance of this species (about 17 or 13–11 kyr cal. BP)1, 2, 3, 7, 11. Instead, the skeletal remains of H. floresiensis and the deposits containing them are dated to between about 100 and 60 kyr ago, whereas stone artefacts attributable to this species range from about 190 to 50 kyr in age. Whether H. floresiensis survived after 50 kyr ago—potentially encountering modern humans on Flores or other hominins dispersing through southeast Asia, such as Denisovans12, 13—is an open question.
Link
December 18, 2015
Archaic femur from Maludong, China
PLoS ONE 10(12): e0143332. doi:10.1371/journal.pone.0143332
A Hominin Femur with Archaic Affinities from the Late Pleistocene of Southwest China
Darren Curnoe et al.
The number of Late Pleistocene hominin species and the timing of their extinction are issues receiving renewed attention following genomic evidence for interbreeding between the ancestors of some living humans and archaic taxa. Yet, major gaps in the fossil record and uncertainties surrounding the age of key fossils have meant that these questions remain poorly understood. Here we describe and compare a highly unusual femur from Late Pleistocene sediments at Maludong (Yunnan), Southwest China, recovered along with cranial remains that exhibit a mixture of anatomically modern human and archaic traits. Our studies show that the Maludong femur has affinities to archaic hominins, especially Lower Pleistocene femora. However, the scarcity of later Middle and Late Pleistocene archaic remains in East Asia makes an assessment of systematically relevant character states difficult, warranting caution in assigning the specimen to a species at this time. The Maludong fossil probably samples an archaic population that survived until around 14,000 years ago in the biogeographically complex region of Southwest China.
Link
A Hominin Femur with Archaic Affinities from the Late Pleistocene of Southwest China
Darren Curnoe et al.
The number of Late Pleistocene hominin species and the timing of their extinction are issues receiving renewed attention following genomic evidence for interbreeding between the ancestors of some living humans and archaic taxa. Yet, major gaps in the fossil record and uncertainties surrounding the age of key fossils have meant that these questions remain poorly understood. Here we describe and compare a highly unusual femur from Late Pleistocene sediments at Maludong (Yunnan), Southwest China, recovered along with cranial remains that exhibit a mixture of anatomically modern human and archaic traits. Our studies show that the Maludong femur has affinities to archaic hominins, especially Lower Pleistocene femora. However, the scarcity of later Middle and Late Pleistocene archaic remains in East Asia makes an assessment of systematically relevant character states difficult, warranting caution in assigning the specimen to a species at this time. The Maludong fossil probably samples an archaic population that survived until around 14,000 years ago in the biogeographically complex region of Southwest China.
Link
November 18, 2015
Two more Denisovans (Sawyer, Renaud et al. 2015)
PNAS doi: 10.1073/pnas.1519905112
Nuclear and mitochondrial DNA sequences from two Denisovan individuals
Susanna Sawyer, Gabriel Renaud et al.
Denisovans, a sister group of Neandertals, have been described on the basis of a nuclear genome sequence from a finger phalanx (Denisova 3) found in Denisova Cave in the Altai Mountains. The only other Denisovan specimen described to date is a molar (Denisova 4) found at the same site. This tooth carries a mtDNA sequence similar to that of Denisova 3. Here we present nuclear DNA sequences from Denisova 4 and a morphological description, as well as mitochondrial and nuclear DNA sequence data, from another molar (Denisova 8) found in Denisova Cave in 2010. This new molar is similar to Denisova 4 in being very large and lacking traits typical of Neandertals and modern humans. Nuclear DNA sequences from the two molars form a clade with Denisova 3. The mtDNA of Denisova 8 is more diverged and has accumulated fewer substitutions than the mtDNAs of the other two specimens, suggesting Denisovans were present in the region over an extended period. The nuclear DNA sequence diversity among the three Denisovans is comparable to that among six Neandertals, but lower than that among present-day humans.
Link
Nuclear and mitochondrial DNA sequences from two Denisovan individuals
Susanna Sawyer, Gabriel Renaud et al.
Denisovans, a sister group of Neandertals, have been described on the basis of a nuclear genome sequence from a finger phalanx (Denisova 3) found in Denisova Cave in the Altai Mountains. The only other Denisovan specimen described to date is a molar (Denisova 4) found at the same site. This tooth carries a mtDNA sequence similar to that of Denisova 3. Here we present nuclear DNA sequences from Denisova 4 and a morphological description, as well as mitochondrial and nuclear DNA sequence data, from another molar (Denisova 8) found in Denisova Cave in 2010. This new molar is similar to Denisova 4 in being very large and lacking traits typical of Neandertals and modern humans. Nuclear DNA sequences from the two molars form a clade with Denisova 3. The mtDNA of Denisova 8 is more diverged and has accumulated fewer substitutions than the mtDNAs of the other two specimens, suggesting Denisovans were present in the region over an extended period. The nuclear DNA sequence diversity among the three Denisovans is comparable to that among six Neandertals, but lower than that among present-day humans.
Link
October 15, 2015
Modern humans in China ~80,000 years ago (?)
Another (?)-worthy paper has just appeared in Nature in the heels of the African ancient genome paper. Time will tell how these worldview-altering discoveries will change the story of Mankind, and a degree of skepticism is warranted. In the view I've held for a few years, modern humans expanded to Arabia before 100 thousand years ago, started leaving it 70 thousand years ago as the ecological situation worsened due to desertification and broke through the "Neandertal barrier" between 70-50 thousand years ago when they developed the skills and technology to overcome them.
The new paper claims that modern humans were in China 80 thousand years ago and came to Europe much later because Neandertal represented a barrier to successful entry to Europe. This begs the question of how they reached China without encountering Neandertals, as Neandertals were also in West Asia where -presumably- they passed through to get to China. A coastal route to south China would explain away this problem, but the coastal migration is usually envisioned much later, at around 60 thousand years ago. On top of that, how did Chinese end up having equal (or more) levels of Neandertals admixture if modern humans first went to China and later moved west and successfully outcompeted the Neandertals. How were they able to do so eventually? (There is no evidence that the kind of advantages associated with behavioral modernity first emerged in East Asia). It's possible that there were 80 thousand year-old modern humans in China (just as there were 100 thousand year-old modern humans in Israel), but that the later East Asians are not descended from them.
One would think that science would present an increasingly reasonable and consistent picture of the past, but it seems that we're a very long way from the point where the dust settles and the puzzle pieces start falling into place.
Nature (2015) doi:10.1038/nature15696
The earliest unequivocally modern humans in southern China
Wu Liu, María Martinón-Torres, Yan-jun Cai, Song Xing, Hao-wen Tong, Shu-wen Pei, Mark Jan Sier, Xiao-hong Wu, R. Lawrence Edwards, Hai Cheng, Yi-yuan Li, Xiong-xin Yang, José María Bermúdez de Castro & Xiu-jie Wu
The hominin record from southern Asia for the early Late Pleistocene epoch is scarce. Well-dated and well-preserved fossils older than ~45,000 years that can be unequivocally attributed to Homo sapiens are lacking1, 2, 3, 4. Here we present evidence from the newly excavated Fuyan Cave in Daoxian (southern China). This site has provided 47 human teeth dated to more than 80,000 years old, and with an inferred maximum age of 120,000 years. The morphological and metric assessment of this sample supports its unequivocal assignment to H. sapiens. The Daoxian sample is more derived than any other anatomically modern humans, resembling middle-to-late Late Pleistocene specimens and even contemporary humans. Our study shows that fully modern morphologies were present in southern China 30,000–70,000 years earlier than in the Levant and Europe5, 6, 7. Our data fill a chronological and geographical gap that is relevant for understanding when H. sapiens first appeared in southern Asia. The Daoxian teeth also support the hypothesis that during the same period, southern China was inhabited by more derived populations than central and northern China. This evidence is important for the study of dispersal routes of modern humans. Finally, our results are relevant to exploring the reasons for the relatively late entry of H. sapiens into Europe. Some studies have investigated how the competition with H. sapiens may have caused Neanderthals’ extinction (see ref. 8 and references therein). Notably, although fully modern humans were already present in southern China at least as early as ~80,000 years ago, there is no evidence that they entered Europe before ~45,000 years ago. This could indicate that H. neanderthalensis was indeed an additional ecological barrier for modern humans, who could only enter Europe when the demise of Neanderthals had already started.
Link
The new paper claims that modern humans were in China 80 thousand years ago and came to Europe much later because Neandertal represented a barrier to successful entry to Europe. This begs the question of how they reached China without encountering Neandertals, as Neandertals were also in West Asia where -presumably- they passed through to get to China. A coastal route to south China would explain away this problem, but the coastal migration is usually envisioned much later, at around 60 thousand years ago. On top of that, how did Chinese end up having equal (or more) levels of Neandertals admixture if modern humans first went to China and later moved west and successfully outcompeted the Neandertals. How were they able to do so eventually? (There is no evidence that the kind of advantages associated with behavioral modernity first emerged in East Asia). It's possible that there were 80 thousand year-old modern humans in China (just as there were 100 thousand year-old modern humans in Israel), but that the later East Asians are not descended from them.
One would think that science would present an increasingly reasonable and consistent picture of the past, but it seems that we're a very long way from the point where the dust settles and the puzzle pieces start falling into place.
Nature (2015) doi:10.1038/nature15696
The earliest unequivocally modern humans in southern China
Wu Liu, María Martinón-Torres, Yan-jun Cai, Song Xing, Hao-wen Tong, Shu-wen Pei, Mark Jan Sier, Xiao-hong Wu, R. Lawrence Edwards, Hai Cheng, Yi-yuan Li, Xiong-xin Yang, José María Bermúdez de Castro & Xiu-jie Wu
The hominin record from southern Asia for the early Late Pleistocene epoch is scarce. Well-dated and well-preserved fossils older than ~45,000 years that can be unequivocally attributed to Homo sapiens are lacking1, 2, 3, 4. Here we present evidence from the newly excavated Fuyan Cave in Daoxian (southern China). This site has provided 47 human teeth dated to more than 80,000 years old, and with an inferred maximum age of 120,000 years. The morphological and metric assessment of this sample supports its unequivocal assignment to H. sapiens. The Daoxian sample is more derived than any other anatomically modern humans, resembling middle-to-late Late Pleistocene specimens and even contemporary humans. Our study shows that fully modern morphologies were present in southern China 30,000–70,000 years earlier than in the Levant and Europe5, 6, 7. Our data fill a chronological and geographical gap that is relevant for understanding when H. sapiens first appeared in southern Asia. The Daoxian teeth also support the hypothesis that during the same period, southern China was inhabited by more derived populations than central and northern China. This evidence is important for the study of dispersal routes of modern humans. Finally, our results are relevant to exploring the reasons for the relatively late entry of H. sapiens into Europe. Some studies have investigated how the competition with H. sapiens may have caused Neanderthals’ extinction (see ref. 8 and references therein). Notably, although fully modern humans were already present in southern China at least as early as ~80,000 years ago, there is no evidence that they entered Europe before ~45,000 years ago. This could indicate that H. neanderthalensis was indeed an additional ecological barrier for modern humans, who could only enter Europe when the demise of Neanderthals had already started.
Link
June 24, 2015
Oase1 had a Neandertal ancestor no earlier than ~200 years before his time
Several important conclusions of the discovery that Oase1 had a Neandertal ancestor 4-6 generations before his time (37-42 thousand years ago):
Nature (2015) doi:10.1038/nature14558
An early modern human from Romania with a recent Neanderthal ancestor
Qiaomei Fu, Mateja Hajdinjak, Oana Teodora Moldovan, Silviu Constantin, Swapan Mallick, Pontus Skoglund, Nick Patterson, Nadin Rohland, Iosif Lazaridis, Birgit Nickel, Bence Viola, Kay Prüfer, Matthias Meyer, Janet Kelso, David Reich & Svante Pääbo
Neanderthals are thought to have disappeared in Europe approximately 39,000–41,000 years ago but they have contributed 1–3% of the DNA of present-day people in Eurasia1. Here we analyse DNA from a 37,000–42,000-year-old2 modern human from Peştera cu Oase, Romania. Although the specimen contains small amounts of human DNA, we use an enrichment strategy to isolate sites that are informative about its relationship to Neanderthals and present-day humans. We find that on the order of 6–9% of the genome of the Oase individual is derived from Neanderthals, more than any other modern human sequenced to date. Three chromosomal segments of Neanderthal ancestry are over 50 centimorgans in size, indicating that this individual had a Neanderthal ancestor as recently as four to six generations back. However, the Oase individual does not share more alleles with later Europeans than with East Asians, suggesting that the Oase population did not contribute substantially to later humans in Europe.
Link
- This is a smoking gun that modern humans interbred with Neandertals, following up on the publication of the Ust'Ishim and Kostenki-14 genomes; these two had longer Neandertal chunks than modern humans, from which it was estimated that their Neandertal admixture happened more than 50,000 years ago, roughly what one gets when looking at Neandertal chunks in modern humans alone. The Oase1 has even longer Neandertal chunks, and Neandertal admixture happened in its very recent past.
- So, it seems that Neandertal admixture was not a one-off event but is bracketed at least by the period 50-40 thousand years ago and happened in at least two places: Europe and the Near East.
- The fact that the earliest European sample (N=1) has a recent Neandertal ancestor indicates that Neandertal admixture in the earliest Europeans cannot have been extremely rare or non-existent; if it were, the chances of finding one with the first try would be extremely low.
- It is unlikely that Neandertals were killed off by modern humans immediately after the arrival of the latter in Europe, as the Oase1 is dated well after the arrival of modern humans to Europe.
- Modern Europeans don't seem to be particularly related to the population of Oase1. After one substracts contamination and Neandertal admixture, what is left over is actually closer to East Asians than modern Europeans. But, it's equally close to East Asians and European hunter-gatherers. This can be explained if modern Europeans have ancestry from the mysterious "Basal Eurasians" via the Neolithic farmers.
Why did the Neandertals (and the significantly-Neandertal admixed AMH like Oase1) disappear? My bet is on the Campanian Ignibrite eruption.
An early modern human from Romania with a recent Neanderthal ancestor
Qiaomei Fu, Mateja Hajdinjak, Oana Teodora Moldovan, Silviu Constantin, Swapan Mallick, Pontus Skoglund, Nick Patterson, Nadin Rohland, Iosif Lazaridis, Birgit Nickel, Bence Viola, Kay Prüfer, Matthias Meyer, Janet Kelso, David Reich & Svante Pääbo
Neanderthals are thought to have disappeared in Europe approximately 39,000–41,000 years ago but they have contributed 1–3% of the DNA of present-day people in Eurasia1. Here we analyse DNA from a 37,000–42,000-year-old2 modern human from Peştera cu Oase, Romania. Although the specimen contains small amounts of human DNA, we use an enrichment strategy to isolate sites that are informative about its relationship to Neanderthals and present-day humans. We find that on the order of 6–9% of the genome of the Oase individual is derived from Neanderthals, more than any other modern human sequenced to date. Three chromosomal segments of Neanderthal ancestry are over 50 centimorgans in size, indicating that this individual had a Neanderthal ancestor as recently as four to six generations back. However, the Oase individual does not share more alleles with later Europeans than with East Asians, suggesting that the Oase population did not contribute substantially to later humans in Europe.
Link
June 20, 2015
DNA from hot climates technically feasible
From the paper:
PLoS ONE 10(6): e0129102. doi:10.1371/journal.pone.0129102
Optimal Ancient DNA Yields from the Inner Ear Part of the Human Petrous Bone
Ron Pinhasi et al.
The invention and development of next or second generation sequencing methods has resulted in a dramatic transformation of ancient DNA research and allowed shotgun sequencing of entire genomes from fossil specimens. However, although there are exceptions, most fossil specimens contain only low (~ 1% or less) percentages of endogenous DNA. The only skeletal element for which a systematically higher endogenous DNA content compared to other skeletal elements has been shown is the petrous part of the temporal bone. In this study we investigate whether (a) different parts of the petrous bone of archaeological human specimens give different percentages of endogenous DNA yields, (b) there are significant differences in average DNA read lengths, damage patterns and total DNA concentration, and (c) it is possible to obtain endogenous ancient DNA from petrous bones from hot environments. We carried out intra-petrous comparisons for ten petrous bones from specimens from Holocene archaeological contexts across Eurasia dated between 10,000-1,800 calibrated years before present (cal. BP). We obtained shotgun DNA sequences from three distinct areas within the petrous: a spongy part of trabecular bone (part A), the dense part of cortical bone encircling the osseous inner ear, or otic capsule (part B), and the dense part within the otic capsule (part C). Our results confirm that dense bone parts of the petrous bone can provide high endogenous aDNA yields and indicate that endogenous DNA fractions for part C can exceed those obtained for part B by up to 65-fold and those from part A by up to 177-fold, while total endogenous DNA concentrations are up to 126-fold and 109-fold higher for these comparisons. Our results also show that while endogenous yields from part C were lower than 1% for samples from hot (both arid and humid) parts, the DNA damage patterns indicate that at least some of the reads originate from ancient DNA molecules, potentially enabling ancient DNA analyses of samples from hot regions that are otherwise not amenable to ancient DNA analyses.
Link
Ten petrous bones were selected from archaeological specimens, representing a wide range of geographical locations and climatic contexts (Table 1, for repository information see S1 File). The specimens were selected from Central Europe, Central Asia, Southeast Asia, the Levant, Anatolia, and North Africa. The specimens are from Holocene archaeological contexts dated to between 10,000–1,800 calibrated years before present (cal. BP). The samples from Nubia, Jordan and Turkmenistan are from hot and arid regions. The sample from Turkey is from the Eastern Mediterranean (northwestern Turkey); the samples from Hungary and Serbia are from the Carpathian Basin/Southeast Europe, while the two samples from Cambodia and Vietnam are from tropical/subtropical Southeast Asia. We also included a metatarsal bone for one Neolithic individual from Hungary (Polgár Ferenci hát, PF280-443) as a control to confirm the differences between petrous and non-petrous reported in the previous study [8].and:
It has recently been demonstrated [8] that petrous bone samples yield exceptionally high percentages of endogenous ancient DNA. Here we have shown that both the total amount of endogenous DNA that can be recovered as well as the percentage of all reads that represents endogenous DNA vary substantially for different parts of the petrous bone. Our results have several implications for aDNA studies. The results support the hypothesis that dense bone parts are especially suitable for ancient DNA research, with the densest part of the petrous bone, that which composes the otic capsule, providing the best results. For our samples the yields obtained for this part (part C) exceed those obtained for part B (i.e. dense bone part of the petrous outside the otic capsule) by up to 65-fold and those from part A by up to 177-fold. It is therefore apparent that while high endogenous yields can be obtained from part B, and hence from any dense part in the petrous, optimal yields should be obtained from bone sample taken directly from the otic capsule.and:
Finally, our results show that endogenous yields from the five samples which originated from hot (either arid or humid) regions were always lower than 1% including extractions from part C of the petrous bone. However, deamination patterns suggest for two (Ain Ghazal and Vat Komnou) of the three samples for which we obtained sufficient numbers of reads that the obtained sequences are likely endogenous to the bones (S3 Fig). In contrast, the deamination pattern for the third sample, Man Bac, suggests that the human reads obtained are more likely to represent contamination than endogenous ancient DNA. These results suggest that it may be possible to obtain endogenous DNA from part C also for samples with relatively low amounts of endogenous DNA from hot environments, although extreme caution will be necessary in the interpretation of the results obtained from such samples.
PLoS ONE 10(6): e0129102. doi:10.1371/journal.pone.0129102
Optimal Ancient DNA Yields from the Inner Ear Part of the Human Petrous Bone
Ron Pinhasi et al.
The invention and development of next or second generation sequencing methods has resulted in a dramatic transformation of ancient DNA research and allowed shotgun sequencing of entire genomes from fossil specimens. However, although there are exceptions, most fossil specimens contain only low (~ 1% or less) percentages of endogenous DNA. The only skeletal element for which a systematically higher endogenous DNA content compared to other skeletal elements has been shown is the petrous part of the temporal bone. In this study we investigate whether (a) different parts of the petrous bone of archaeological human specimens give different percentages of endogenous DNA yields, (b) there are significant differences in average DNA read lengths, damage patterns and total DNA concentration, and (c) it is possible to obtain endogenous ancient DNA from petrous bones from hot environments. We carried out intra-petrous comparisons for ten petrous bones from specimens from Holocene archaeological contexts across Eurasia dated between 10,000-1,800 calibrated years before present (cal. BP). We obtained shotgun DNA sequences from three distinct areas within the petrous: a spongy part of trabecular bone (part A), the dense part of cortical bone encircling the osseous inner ear, or otic capsule (part B), and the dense part within the otic capsule (part C). Our results confirm that dense bone parts of the petrous bone can provide high endogenous aDNA yields and indicate that endogenous DNA fractions for part C can exceed those obtained for part B by up to 65-fold and those from part A by up to 177-fold, while total endogenous DNA concentrations are up to 126-fold and 109-fold higher for these comparisons. Our results also show that while endogenous yields from part C were lower than 1% for samples from hot (both arid and humid) parts, the DNA damage patterns indicate that at least some of the reads originate from ancient DNA molecules, potentially enabling ancient DNA analyses of samples from hot regions that are otherwise not amenable to ancient DNA analyses.
Link
March 06, 2015
Craniofacial plasticity in ancient Peru
Anthropologischer Anzeiger doi:10.1127/anthranz/2015/0458
Craniofacial plasticity in ancient Peru
Jessica H. Stone; Kristen Chew; Ann H. Ross; John W. Verano
Numerous studies have utilized craniometric data to explore the roles of genetic diversity and environment in human cranial shape variation. Peru is a particularly interesting region to examine cranial variation due to the wide variety of high and low altitude ecological zones, which in combination with rugged terrain have created isolated populations with vastly different physiological adaptations. This study examines seven samples from throughout Peru in an effort to understand the contributions of environmental adaptation and genetic relatedness to craniofacial variation at a regional scale. Morphological variation was investigated using a canonical discriminant analysis and Mahalanobis D2 analysis. Results indicate that all groups are significantly different from one another with the closest relationship between Yauyos and Jahuay, two sites that are located geographically close in central Peru but in very different ecozones. The relationship between latitude/longitude and face shape was also examined with a spatial autocorrelation analysis (Moran’s I) using ArcMap and show that there is significant spatial patterning for facial measures and geographic location suggesting that there is an association between biological variation and geographic location.
Link
Craniofacial plasticity in ancient Peru
Jessica H. Stone; Kristen Chew; Ann H. Ross; John W. Verano
Numerous studies have utilized craniometric data to explore the roles of genetic diversity and environment in human cranial shape variation. Peru is a particularly interesting region to examine cranial variation due to the wide variety of high and low altitude ecological zones, which in combination with rugged terrain have created isolated populations with vastly different physiological adaptations. This study examines seven samples from throughout Peru in an effort to understand the contributions of environmental adaptation and genetic relatedness to craniofacial variation at a regional scale. Morphological variation was investigated using a canonical discriminant analysis and Mahalanobis D2 analysis. Results indicate that all groups are significantly different from one another with the closest relationship between Yauyos and Jahuay, two sites that are located geographically close in central Peru but in very different ecozones. The relationship between latitude/longitude and face shape was also examined with a spatial autocorrelation analysis (Moran’s I) using ArcMap and show that there is significant spatial patterning for facial measures and geographic location suggesting that there is an association between biological variation and geographic location.
Link
February 25, 2015
KNM-LH1: a 23,000 year old human from Kenya
From the paper:
PNAS doi: 10.1073/pnas.1417909112
Late Pleistocene age and archaeological context for the hominin calvaria from GvJm-22 (Lukenya Hill, Kenya)
Christian A. Tryon et al.
Kenya National Museums Lukenya Hill Hominid 1 (KNM-LH 1) is a Homo sapiens partial calvaria from site GvJm-22 at Lukenya Hill, Kenya, associated with Later Stone Age (LSA) archaeological deposits. KNM-LH 1 is securely dated to the Late Pleistocene, and samples a time and region important for understanding the origins of modern human diversity. A revised chronology based on 26 accelerator mass spectrometry radiocarbon dates on ostrich eggshells indicates an age range of 23,576–22,887 y B.P. for KNM-LH 1, confirming prior attribution to the Last Glacial Maximum. Additional dates extend the maximum age for archaeological deposits at GvJm-22 to >46,000 y B.P. (>46 kya). These dates are consistent with new analyses identifying both Middle Stone Age and LSA lithic technologies at the site, making GvJm-22 a rare eastern African record of major human behavioral shifts during the Late Pleistocene. Comparative morphometric analyses of the KNM-LH 1 cranium document the temporal and spatial complexity of early modern human morphological variability. Features of cranial shape distinguish KNM-LH 1 and other Middle and Late Pleistocene African fossils from crania of recent Africans and samples from Holocene LSA and European Upper Paleolithic sites.
Link
KNM-LH 1 and other Pleistocene African specimens, all of which are potentially sampling candidate populations for dispersals across and out of Africa during the Late Pleistocene (12–15, 50, 59), differ substantially not only from recent Africans but also from individuals drawn from Holocene LSA archaeological sites. KNM-LH 1 and other Pleistocene African specimens (found with MSA and LSA artifacts) are also distinct from most EUP individuals.Things are looking good for my Afrasian-Palaeoafrican admixture hypothesis which postulates that modern Africans are a mixture of "Afrasians" (a group of humans that also spilled over into Eurasia and/or back-migrated to Africa) and various groups of very divergent "Palaeoafrican" populations. In the context of this hypothesis, greater African genetic diversity is understood not as the result of a bottleneck of epic proportions during Out-of-Africa, but rather as a result of admixture between the two groups.
PNAS doi: 10.1073/pnas.1417909112
Late Pleistocene age and archaeological context for the hominin calvaria from GvJm-22 (Lukenya Hill, Kenya)
Christian A. Tryon et al.
Kenya National Museums Lukenya Hill Hominid 1 (KNM-LH 1) is a Homo sapiens partial calvaria from site GvJm-22 at Lukenya Hill, Kenya, associated with Later Stone Age (LSA) archaeological deposits. KNM-LH 1 is securely dated to the Late Pleistocene, and samples a time and region important for understanding the origins of modern human diversity. A revised chronology based on 26 accelerator mass spectrometry radiocarbon dates on ostrich eggshells indicates an age range of 23,576–22,887 y B.P. for KNM-LH 1, confirming prior attribution to the Last Glacial Maximum. Additional dates extend the maximum age for archaeological deposits at GvJm-22 to >46,000 y B.P. (>46 kya). These dates are consistent with new analyses identifying both Middle Stone Age and LSA lithic technologies at the site, making GvJm-22 a rare eastern African record of major human behavioral shifts during the Late Pleistocene. Comparative morphometric analyses of the KNM-LH 1 cranium document the temporal and spatial complexity of early modern human morphological variability. Features of cranial shape distinguish KNM-LH 1 and other Middle and Late Pleistocene African fossils from crania of recent Africans and samples from Holocene LSA and European Upper Paleolithic sites.
Link
January 28, 2015
~55 thousand year old modern human from Manot cave in Israel
It seems that this abstract came online one day early on my news feed and will probably appear in Nature tomorrow. I will update this entry when the paper properly appears. This is of course very important because it directly proves that modern humans appear in Eurasia before the Upper Paleolithic revolution, and disproves the theory that modern humans spread UP technologies with an expansion out of Africa.
We will have to wait until tomorrow to see exactly what they compared it against. The abstract contrasts it with "other early AMH" from the Levant, which I presume means the Skhul/Qafzeh specimens of ~50ka earlier than Manot. But, they also say that it is similar to UP Europeans and recent Africans, which suggests that they did not find any particular similarities to old African skulls of which there are many.
UPDATE: The paper is now online
UPDATE I: The authors write:
African samples like Omo-2, LH18, and and Jebel Irhoud 1/2 don't look anything like modern humans. It is quite strange that the authors interpret this evidence as discontinuity between ~100ka humans from the Levant and replacement by a fresh Out-of-Africa wave, when in fact all the Qafzeh/Skhul remains (and a couple of Neandertals) look much more plausible relatives of Manot than any of the ancient African samples. Not single sample has been found in Africa from the mysterious hypothetical ancestral population of modern humans that supposedly colonized Eurasia ~60ka. As far as I can tell, this theory has nothing to support it, except, perhaps, (i) some misinterpretation of old genetic data based on the now discredited "fast" mutation rate, and (ii) the belief that behavioral modernity first arose in Africa and coincided with the spread of modern humans from that continent into Eurasia.
Nature advance online publication 28 January 2015. doi:10.1038/nature14134
Levantine cranium from Manot Cave (Israel) foreshadows the first European modern humans
Authors: Israel Hershkovitz, Ofer Marder, Avner Ayalon, Miryam Bar-Matthews, Gal Yasur, Elisabetta Boaretto, Valentina Caracuta, Bridget Alex, Amos Frumkin, Mae Goder-Goldberger, Philipp Gunz, Ralph L. Holloway, Bruce Latimer, Ron Lavi, Alan Matthews, Viviane Slon, Daniella Bar-Yosef Mayer, Francesco Berna, Guy Bar-Oz, Reuven Yeshurun, Hila May, Mark G. Hans, Gerhard W. Weber & Omry Barzilai
A key event in human evolution is the expansion of modern humans of African origin across Eurasia between 60 and 40 thousand years (kyr) before present (bp), replacing all other forms of hominins. Owing to the scarcity of human fossils from this period, these ancestors of all present-day non-African modern populations remain largely enigmatic. Here we describe a partial calvaria, recently discovered at Manot Cave (Western Galilee, Israel) and dated to 54.7 ± 5.5 kyr bp (arithmetic mean ± 2 standard deviations) by uranium–thorium dating, that sheds light on this crucial event. The overall shape and discrete morphological features of the Manot 1 calvaria demonstrate that this partial skull is unequivocally modern. It is similar in shape to recent African skulls as well as to European skulls from the Upper Palaeolithic period, but different from most other early anatomically modern humans in the Levant. This suggests that the Manot people could be closely related to the first modern humans who later successfully colonized Europe. Thus, the anatomical features used to support the ‘assimilation model’ in Europe might not have been inherited from European Neanderthals, but rather from earlier Levantine populations. Moreover, at present, Manot 1 is the only modern human specimen to provide evidence that during the Middle to Upper Palaeolithic interface, both modern humans and Neanderthals contemporaneously inhabited the southern Levant, close in time to the likely interbreeding event with Neanderthals.
Link
We will have to wait until tomorrow to see exactly what they compared it against. The abstract contrasts it with "other early AMH" from the Levant, which I presume means the Skhul/Qafzeh specimens of ~50ka earlier than Manot. But, they also say that it is similar to UP Europeans and recent Africans, which suggests that they did not find any particular similarities to old African skulls of which there are many.
UPDATE: The paper is now online
UPDATE I: The authors write:
Manot 1 could also have been a direct descendant of early AMH populations (such as Skhul/Qafzeh), but the differences in morphology between Manot 1 and the majority of fossils from these sites render this possibility unlikely (Supplementary InformationC).However, it should be noted that within- and between-group morphological variations in these populations are extremely large18, rendering any conclusion based exclusively on morphology as tentative. Nevertheless, the absence of
otherAMHspecimens in the Levant between the Skhul/Qafzeh material (,120–90 kyr ago) and the later appearing Manot 1 (,55 kyr ago) does not support the hypothesis of continuous representation and local evolution of AMHs in the Levant.
On the other hand, the considerably fluctuating climatic conditions during MIS 5 and 4 (favouring an alteration of differently adapted populations), the unequivocal presence of Neanderthals in the region in the time gap between early AMHs and the Manot population, and the continuing evolution of AMHs in Africa19 advocate for the most parsimonious explanation, which is that theManot people re-colonized the Levant from Africa, rather than evolved in situ.I don't buy this explanation. The key phrase is "the majority of fossils". In Figure 3 is it is clear that Qafzeh 9 is completely modern. Moreover, UP Europeans like Cro-Magnon 3, Mladec 6/5 are close to AMH Levantine specimens such as Skhul-5 and Qafzeh-6. Indeed, the late Neandertals such as Shanidar and Amud are already moving towards "modern" humans.
African samples like Omo-2, LH18, and and Jebel Irhoud 1/2 don't look anything like modern humans. It is quite strange that the authors interpret this evidence as discontinuity between ~100ka humans from the Levant and replacement by a fresh Out-of-Africa wave, when in fact all the Qafzeh/Skhul remains (and a couple of Neandertals) look much more plausible relatives of Manot than any of the ancient African samples. Not single sample has been found in Africa from the mysterious hypothetical ancestral population of modern humans that supposedly colonized Eurasia ~60ka. As far as I can tell, this theory has nothing to support it, except, perhaps, (i) some misinterpretation of old genetic data based on the now discredited "fast" mutation rate, and (ii) the belief that behavioral modernity first arose in Africa and coincided with the spread of modern humans from that continent into Eurasia.
Nature advance online publication 28 January 2015. doi:10.1038/nature14134
Levantine cranium from Manot Cave (Israel) foreshadows the first European modern humans
Authors: Israel Hershkovitz, Ofer Marder, Avner Ayalon, Miryam Bar-Matthews, Gal Yasur, Elisabetta Boaretto, Valentina Caracuta, Bridget Alex, Amos Frumkin, Mae Goder-Goldberger, Philipp Gunz, Ralph L. Holloway, Bruce Latimer, Ron Lavi, Alan Matthews, Viviane Slon, Daniella Bar-Yosef Mayer, Francesco Berna, Guy Bar-Oz, Reuven Yeshurun, Hila May, Mark G. Hans, Gerhard W. Weber & Omry Barzilai
A key event in human evolution is the expansion of modern humans of African origin across Eurasia between 60 and 40 thousand years (kyr) before present (bp), replacing all other forms of hominins. Owing to the scarcity of human fossils from this period, these ancestors of all present-day non-African modern populations remain largely enigmatic. Here we describe a partial calvaria, recently discovered at Manot Cave (Western Galilee, Israel) and dated to 54.7 ± 5.5 kyr bp (arithmetic mean ± 2 standard deviations) by uranium–thorium dating, that sheds light on this crucial event. The overall shape and discrete morphological features of the Manot 1 calvaria demonstrate that this partial skull is unequivocally modern. It is similar in shape to recent African skulls as well as to European skulls from the Upper Palaeolithic period, but different from most other early anatomically modern humans in the Levant. This suggests that the Manot people could be closely related to the first modern humans who later successfully colonized Europe. Thus, the anatomical features used to support the ‘assimilation model’ in Europe might not have been inherited from European Neanderthals, but rather from earlier Levantine populations. Moreover, at present, Manot 1 is the only modern human specimen to provide evidence that during the Middle to Upper Palaeolithic interface, both modern humans and Neanderthals contemporaneously inhabited the southern Levant, close in time to the likely interbreeding event with Neanderthals.
Link
October 10, 2014
Tomb II at Vergina belonged to Philip II and a possible Scythian wife
Remains of Alexander the Great's Father Confirmed Found
A team of Greek researchers has confirmed that bones found in a two-chambered royal tomb at Vergina, a town some 100 miles away from Amphipolis's mysterious burial mound, indeed belong to the Macedonian King Philip II, Alexander the Great's father.
The anthropological investigation examined 350 bones and fragments found in two larnakes, or caskets, of the tomb. It uncovered pathologies, activity markers and trauma that helped identify the tomb's occupants.
Along with the cremated remains of Philip II, the burial, commonly known as Tomb II, also contained the bones of a woman warrior, possibly the daughter of the Skythian King Athea, Theodore Antikas, head of the Art-Anthropological research team of the Vergina excavation, told Discovery News.
July 17, 2014
Craniofacial feminization and the origin of behavioral modernity
Current Anthropology Vol. 55, No. 4, August 2014
Robert L. Cieri et al.
Abstract:
The past 200,000 years of human cultural evolution have witnessed the persistent establishment of behaviors involving innovation, planning depth, and abstract and symbolic thought, or what has been called “behavioral modernity.” Demographic models based on increased human population density from the late Pleistocene onward have been increasingly invoked to understand the emergence of behavioral modernity. However, high levels of social tolerance, as seen among living humans, are a necessary prerequisite to life at higher population densities and to the kinds of cooperative cultural behaviors essential to these demographic models. Here we provide data on craniofacial feminization (reduction in average brow ridge projection and shortening of the upper facial skeleton) in Homo sapiens from the Middle Pleistocene to recent times. We argue that temporal changes in human craniofacial morphology reflect reductions in average androgen reactivity (lower levels of adult circulating testosterone or reduced androgen receptor densities), which in turn reflect the evolution of enhanced social tolerance since the Middle Pleistocene.
Link
Robert L. Cieri et al.
Abstract:
The past 200,000 years of human cultural evolution have witnessed the persistent establishment of behaviors involving innovation, planning depth, and abstract and symbolic thought, or what has been called “behavioral modernity.” Demographic models based on increased human population density from the late Pleistocene onward have been increasingly invoked to understand the emergence of behavioral modernity. However, high levels of social tolerance, as seen among living humans, are a necessary prerequisite to life at higher population densities and to the kinds of cooperative cultural behaviors essential to these demographic models. Here we provide data on craniofacial feminization (reduction in average brow ridge projection and shortening of the upper facial skeleton) in Homo sapiens from the Middle Pleistocene to recent times. We argue that temporal changes in human craniofacial morphology reflect reductions in average androgen reactivity (lower levels of adult circulating testosterone or reduced androgen receptor densities), which in turn reflect the evolution of enhanced social tolerance since the Middle Pleistocene.
Link
July 14, 2014
Armed conflict in the Sahara, ~13 thousand years ago
An interesting story from the Independent:
Scientists are investigating what may be the oldest identified race war 13,000 years after it raged on the fringes of the Sahara. French scientists working in collaboration with the British Museum have been examining dozens of skeletons, a majority of whom appear to have been killed by archers using flint-tipped arrows.
...
Parallel research over recent years has also been shedding new light as to who, in ethnic and racial terms, these victims were.
Work carried out at Liverpool John Moores University, the University of Alaska and New Orleans’ Tulane University indicates that they were part of the general sub-Saharan originating population – the ancestors of modern Black Africans.
The identity of their killers is however less easy to determine. But it is conceivable that they were people from a totally different racial and ethnic group – part of a North African/ Levantine/European people who lived around much of the Mediterranean Basin.
The two groups – although both part of our species, Homo sapiens – would have looked quite different from each other and were also almost certainly different culturally and linguistically. The sub-Saharan originating group had long limbs, relatively short torsos and projecting upper and lower jaws along with rounded foreheads and broad noses, while the North African/Levantine/European originating group had shorter limbs, longer torsos and flatter faces. Both groups were very muscular and strongly built.
July 08, 2014
Neandertal-like temporal labyrinth of Xujiayao 15
From the press release:
PNAS doi: 10.1073/pnas.1410735111
Temporal labyrinths of eastern Eurasian Pleistocene humans
Xiu-Jie Wu et al.
One of the morphological features that has been identified as uniquely derived for the western Eurasian Neandertals concerns the relative sizes and positions of their semicircular canals. In particular, they exhibit a relatively small anterior canal, a relatively larger lateral one, and a more inferior position of the posterior one relative to the lateral one. These discussions have not included full paleontological data on eastern Eurasian Pleistocene human temporal labyrinths, which have the potential to provide a broader context for assessing Pleistocene Homo trait polarities. We present the temporal labyrinths of four eastern Eurasian Pleistocene Homo, one each of Early (Lantian 1), Middle (Hexian 1), and Late (Xujiayao 15) Pleistocene archaic humans and one early modern human (Liujiang 1). The labyrinths of the two earlier specimens and the most recent one conform to the proportions seen among western early and recent modern humans, reinforcing the modern human pattern as generally ancestral for the genus Homo. The labyrinth of Xujiayao 15 is in the middle of the Neandertal variation and separate from the other samples. This eastern Eurasian labyrinthine dichotomy occurs in the context of none of the distinctive Neandertal external temporal or other cranial features. As such, it raises questions regarding possible cranial and postcranial morphological correlates of Homo labyrinthine variation, the use of individual “Neandertal” features for documenting population affinities, and the nature of late archaic human variation across Eurasia.
Link
While it's tempting to use the finding of a Neandertal-shaped labyrinth in an otherwise distinctly "non-Neandertal" sample as evidence of population contact (gene flow) between central and western Eurasian Neandertals and eastern archaic humans in China, Trinkaus and colleagues argue that broader implications of the Xujiayao discovery remain unclear.
"The study of human evolution has always been messy, and these findings just make it all the messier," Trinkaus said. "It shows that human populations in the real world don't act in nice simple patterns.
"Eastern Asia and Western Europe are a long way apart, and these migration patterns took thousands of years to play out," he said. "This study shows that you can't rely on one anatomical feature or one piece of DNA as the basis for sweeping assumptions about the migrations of hominid species from one place to another."I think this study highlights the possibility that some of the traits thought to be characteristic of Neandertals may in fact be part of Eurasian hominins in general, and the fact that they have been associated with Neandertals is a consequence of the much greater attention paid to that species until recently. As East Eurasian Pleistocene Homo becomes better described, it may become clear what are indeed the traits that were specific to H. neanderthalensis.
PNAS doi: 10.1073/pnas.1410735111
Temporal labyrinths of eastern Eurasian Pleistocene humans
Xiu-Jie Wu et al.
One of the morphological features that has been identified as uniquely derived for the western Eurasian Neandertals concerns the relative sizes and positions of their semicircular canals. In particular, they exhibit a relatively small anterior canal, a relatively larger lateral one, and a more inferior position of the posterior one relative to the lateral one. These discussions have not included full paleontological data on eastern Eurasian Pleistocene human temporal labyrinths, which have the potential to provide a broader context for assessing Pleistocene Homo trait polarities. We present the temporal labyrinths of four eastern Eurasian Pleistocene Homo, one each of Early (Lantian 1), Middle (Hexian 1), and Late (Xujiayao 15) Pleistocene archaic humans and one early modern human (Liujiang 1). The labyrinths of the two earlier specimens and the most recent one conform to the proportions seen among western early and recent modern humans, reinforcing the modern human pattern as generally ancestral for the genus Homo. The labyrinth of Xujiayao 15 is in the middle of the Neandertal variation and separate from the other samples. This eastern Eurasian labyrinthine dichotomy occurs in the context of none of the distinctive Neandertal external temporal or other cranial features. As such, it raises questions regarding possible cranial and postcranial morphological correlates of Homo labyrinthine variation, the use of individual “Neandertal” features for documenting population affinities, and the nature of late archaic human variation across Eurasia.
Link
June 21, 2014
Nonmetric dental traits and the origin of East Asians
AJPA DOI: 10.1002/ajpa.22537
Demographic transitions and migration in prehistoric East/Southeast Asiathrough the lens of nonmetric dental traits
Hirofumi Matsumura1,and Marc F. Oxenham
The aim of this study is to examine and assess the nonmetric dental trait evidence for the population history of East and Southeast Asia and, more specifically, to test the two-layer hypothesis for the peopling of Southeast Asia. Using a battery of 21 nonmetric dental traits we examine 7,247 individuals representing 58 samples drawn from East and Southeast Asian populations inhabiting the region from the late Pleistocene, through the Neolithic, Bronze Age, Iron Age, and into the historic and modern periods. The chief data reduction technique is a neighbor-joining tree generated from the triangular matrix of mean measure of divergence values. Principal findings indicated a major dichotomization of the dataset into (1) an early Southeast Asian sample with close affinities to modern Australian and Melanesian populations and (2) a very distinct grouping of ancient and modern Northeast Asians. Distinct patterns of clinal variation among Neolithic and post-Neolithic Mainland Southeast Asian samples suggest a center to periphery spread of genes into the region from Northeast Asia. This pattern is consistent with archaeological and linguistic evidence for demic diffusion that accompanied agriculturally driven population expansion in the Neolithic. Later Metal Age affinities between Island and Mainland coastal populations with Northeast Asian series is likely a consequence of a South China Sea interaction sphere operating from at least 500 BCE, if not from the Neolithic. Such results provide extensive support for the two-layer hypothesis to account for the population history of the region. Am J Phys Anthropol, 2014. © 2014 Wiley Periodicals, Inc.
Link
Demographic transitions and migration in prehistoric East/Southeast Asiathrough the lens of nonmetric dental traits
Hirofumi Matsumura1,and Marc F. Oxenham
The aim of this study is to examine and assess the nonmetric dental trait evidence for the population history of East and Southeast Asia and, more specifically, to test the two-layer hypothesis for the peopling of Southeast Asia. Using a battery of 21 nonmetric dental traits we examine 7,247 individuals representing 58 samples drawn from East and Southeast Asian populations inhabiting the region from the late Pleistocene, through the Neolithic, Bronze Age, Iron Age, and into the historic and modern periods. The chief data reduction technique is a neighbor-joining tree generated from the triangular matrix of mean measure of divergence values. Principal findings indicated a major dichotomization of the dataset into (1) an early Southeast Asian sample with close affinities to modern Australian and Melanesian populations and (2) a very distinct grouping of ancient and modern Northeast Asians. Distinct patterns of clinal variation among Neolithic and post-Neolithic Mainland Southeast Asian samples suggest a center to periphery spread of genes into the region from Northeast Asia. This pattern is consistent with archaeological and linguistic evidence for demic diffusion that accompanied agriculturally driven population expansion in the Neolithic. Later Metal Age affinities between Island and Mainland coastal populations with Northeast Asian series is likely a consequence of a South China Sea interaction sphere operating from at least 500 BCE, if not from the Neolithic. Such results provide extensive support for the two-layer hypothesis to account for the population history of the region. Am J Phys Anthropol, 2014. © 2014 Wiley Periodicals, Inc.
Link
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