tag:blogger.com,1999:blog-7785493.post7997086249241022037..comments2024-01-04T04:11:55.717+02:00Comments on Dienekes’ Anthropology Blog: Haplofind: mtDNA haplogroup assignment toolDienekeshttp://www.blogger.com/profile/02082684850093948970noreply@blogger.comBlogger3125tag:blogger.com,1999:blog-7785493.post-53027676330263581722016-06-30T09:46:56.049+03:002016-06-30T09:46:56.049+03:00Well, initially HaploFind used to be "just&qu...Well, initially HaploFind used to be "just" a high throughput algorithm to perform complete mtDNA sequences classification according to haplogroup nomenclature. At the moment, instead, represent a complete Web Application focused on mtDNA complete sequences annotation. It's based on PhyloTree phylogenetic tree, and uses Mitomap as a source for annotation data.<br /><a href="http://Assignmentfirm.com" rel="nofollow">Assignment help</a>Assignment Helphttps://www.blogger.com/profile/14055154027344362664noreply@blogger.comtag:blogger.com,1999:blog-7785493.post-23192605707434567092014-11-13T20:55:34.958+02:002014-11-13T20:55:34.958+02:00Family Tree, these SNPs are considered "highl...Family Tree, these SNPs are considered "highly volatile", meaning they mutate more frequently than other mtDNA SNPs. Because of this, you can completely match a haplogroup except for that one SNP and still be considered an exact match. As a result, a lot of algorithms tend to leave these SNPs out. Does that help?jenny l phttps://www.blogger.com/profile/05275387263814448953noreply@blogger.comtag:blogger.com,1999:blog-7785493.post-58772389250546827852014-11-08T16:59:47.151+02:002014-11-08T16:59:47.151+02:00I was just looking at the Phylo Tree at PhyloTree....I was just looking at the Phylo Tree at PhyloTree.Org and I was just wondering why the mutations 309.1C(C), 315.1C, AC indels at 515-522, 16182C, 16183C, 16193.1C(C) and 16519 were not considered for phylogenetic reconstruction and are therefore excluded from the tree? <br />I have HVR1 - 16183C<br />If you could explain this to me in simple terms I would appreciate it. Thank you...Family Treehttps://www.blogger.com/profile/06898225804737081894noreply@blogger.com