tag:blogger.com,1999:blog-7785493.post3414325205026900517..comments2024-01-04T04:11:55.717+02:00Comments on Dienekes’ Anthropology Blog: D-statistics on ADMIXTURE componentsDienekeshttp://www.blogger.com/profile/02082684850093948970noreply@blogger.comBlogger5125tag:blogger.com,1999:blog-7785493.post-31097740055453542612012-12-21T13:26:37.040+02:002012-12-21T13:26:37.040+02:00Could you do the analysis on my file. My membershi...Could you do the analysis on my file. My membership number in Dodecad project is DOD865. I wanted to know if 0.1% African is real or not? Could you do it?Kazakhhttps://www.blogger.com/profile/07611402897244291994noreply@blogger.comtag:blogger.com,1999:blog-7785493.post-63293589832426522792012-12-17T08:46:54.221+02:002012-12-17T08:46:54.221+02:00Australasian isn't an outgroup to {East Africa...Australasian isn't an outgroup to {East African, West African}; Australasians are related to other non-Africans, and hence also to East Africans who have West Eurasian admixture.Dienekeshttps://www.blogger.com/profile/02082684850093948970noreply@blogger.comtag:blogger.com,1999:blog-7785493.post-44223158496484032532012-12-17T07:33:44.037+02:002012-12-17T07:33:44.037+02:00[1,] "Pop1" "Pop3" ...[1,] "Pop1" "Pop3" "Outgroup" "Dstat" "Z" <br />[2,]"East_African" "Mediterranean" "Ancestral" -0.10803 -29.46<br /> "East_African" "Mediterranean" "Australasian" -0.03937 -15.87<br /> "East_African" "West_African" "Ancestral" -0.00663 -2.22 <br /> "East_African" "West_African" "Australasian" 0.07242 27.16<br /><br />[1,] "Pop1" "Pop3" "Outgroup" "Dstat" "Z" <br />[2,] "East_African" "Arctic" "Ancestral" "-0.08653" "-23.73"<br />[3,] "East_African" "Siberian" "Ancestral" "-0.08349" "-23.08"<br />[4,] "East_African" "Palaeo_African" "Ancestral" "-0.00427" "-1.41"<br /><br />[1,] "Pop1" "Pop3" "Outgroup" "Dstat" "Z" <br />[2,] "East_African" "Australasian" "Ancestral" "-0.07684" "-20.99"<br />[3,] "East_African" "Amerindian" "Ancestral" "-0.08622" "-23.94"<br />[4,] "East_African" "East_Asian" "Ancestral" "-0.07973" "-22.63"<br /><br />[1,] "Pop1" "Pop3" "Outgroup" "Dstat" "Z" <br />[2,] "East_African" "Southwest_Asian" "Ancestral" "-0.12617" "-35.1" <br />[3,] "Southwest_Asian" "East_African" "Ancestral" "-0.01684" "-5.13"<br /><br />Why the Z-score significance disprecancy for a Somali: pop1East_African, pop3West_African, outgroups ancestral,-2.22 /australasian, 27.16?Epicurioushttps://www.blogger.com/profile/01538475323461286224noreply@blogger.comtag:blogger.com,1999:blog-7785493.post-47103944523415296452012-12-04T12:38:17.423+02:002012-12-04T12:38:17.423+02:00[1,] "Pop1" "Pop3" ...[1,] "Pop1" "Pop3" "Outgroup" "Dstat" "Z" <br /> [2,] "Mediterranean" "North_European" "Palaeo_African" "-0.01484" "-6.62" <br /> [3,] "North_European" "Mediterranean" "Palaeo_African" "-0.01213" "-5.75" <br /> [4,] "West_Asian" "North_European" "Palaeo_African" "-0.01634" "-7.42" <br /> [5,] "North_European" "West_Asian" "Palaeo_African" "0.00678" "3.49" <br /> [6,] "Mediterranean" "West_Asian" "Palaeo_African" "-0.01174" "-5.69" <br /> [7,] "West_Asian" "Mediterranean" "Palaeo_African" "-0.03186" "-14.51"<br /> [8,] "Mediterranean" "Southwest_Asian" "Palaeo_African" "0.00916" "4.34" <br /> [9,] "North_European" "Southwest_Asian" "Palaeo_African" "-0.0064" "-3.02" <br />[10,] "West_Asian" "Southwest_Asian" "Palaeo_African" "-0.0176" "-8.01" <br />[11,] "Mediterranean" "Siberian" "Palaeo_African" "-0.01452" "-6.03" <br />[12,] "North_European" "Siberian" "Palaeo_African" "0.00813" "3.45" <br />[13,] "West_Asian" "Siberian" "Palaeo_African" "-0.00601" "-2.45" <br />[14,] "Mediterranean" "Amerindian" "Palaeo_African" "-0.02186" "-8.76" <br />[15,] "North_European" "Amerindian" "Palaeo_African" "0.01645" "6.78" <br />[16,] "West_Asian" "Amerindian" "Palaeo_African" "-0.00461" "-1.87" <br />[17,] "Mediterranean" "South_Asian" "Palaeo_African" "-0.00649" "-2.95" <br />[18,] "North_European" "South_Asian" "Palaeo_African" "0.00799" "3.76" <br />[19,] "West_Asian" "South_Asian" "Palaeo_African" "-0.00222" "-1.02" <br />[20,] "Mediterranean" "East_Asian" "Palaeo_African" "-0.01169" "-4.84" <br />[21,] "North_European" "East_Asian" "Palaeo_African" "0.00663" "2.85" <br />[22,] "West_Asian" "East_Asian" "Palaeo_African" "-0.00321" "-1.33" <br /><br /><br />So... the North_European component is more West_Asian, Siberian, Amerindian and South_Asian than I am...Westgothhttps://www.blogger.com/profile/07141497998577145332noreply@blogger.comtag:blogger.com,1999:blog-7785493.post-29924788841751616462012-12-04T06:18:47.155+02:002012-12-04T06:18:47.155+02:00Very interesting development.
Just wanted to men...Very interesting development. <br />Just wanted to mention that you wrote<br />setwd('johndoe.txt', company='23andMe')<br />instead of<br />standardize('johndoe.txt', company='23andMe')<br />in the first part of your explanation.Gui Shttps://www.blogger.com/profile/10460980441040040539noreply@blogger.com